If more than 50 genes/sequences are provided as input, then the associated running time can take some time. Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes. After processing you will be send an email with a link to the created phylogenetic tree.
The selection modi are exclusive: please choose either Gene selection or Species selection.
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";
$selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";
$num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 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'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ), 'gf_id' => 'HOM05D000511', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000511' ), 'data_identifier' => 'HOM05D000511', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000511', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1053', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p26170' => 'bna', 'A03p20780' => 'bna', 'A04p22050' => 'bna', 'A07p19470' => 'bna', 'A07p19480' => 'bna', 'A08p35610' => 'bna', 'A09p66350' => 'bna', 'A09p66360' => 'bna', 'A10p06040' => 'bna', 'A10p16670' => 'bna', 'Aa31LG1G11820' => 'aar', 'Aa31LG1G6980' => 'aar', 'Aa31LG1G6990' => 'aar', 'Aa31LG4G15610' => 'aar', 'Aa31LG5G23150' => 'aar', 'Aa31LG5G7180' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1560' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.780' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.1284' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.4775' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1280' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2180' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.385' => 'aag', 'Actinidia02940' => 'ach', 'Actinidia05318' => 'ach', 'Actinidia07017' => 'ach', 'Actinidia07018' => 'ach', 'Actinidia07019' => 'ach', 'Actinidia07020' => 'ach', 'Actinidia07021' => 'ach', 'Actinidia07022' => 'ach', 'Actinidia12907' => 'ach', 'Actinidia13150' => 'ach', 'Actinidia14036' => 'ach', 'Actinidia14037' => 'ach', 'Actinidia14038' => 'ach', 'Actinidia23668' => 'ach', 'Actinidia23928' => 'ach', 'Actinidia34417' => 'ach', 'Actinidia37191' => 'ach', 'Ah.08g219780' => 'amhyb', 'Ah.08g219810' => 'amhyb', 'Ah.08g219820' => 'amhyb', 'Ah.08g219830' => 'amhyb', 'Ah.12g059910' => 'amhyb', 'Ah.15g097700' => 'amhyb', 'Ah.15g097710' => 'amhyb', 'Ah.15g097730' => 'amhyb', 'Ah.16g102440' => 'amhyb', 'AL1G17700' => 'aly', 'AL1G17710' => 'aly', 'AL4G23620' => 'aly', 'AL4G23630' => 'aly', 'AL4G34230' => 'aly', 'AL4G34270' => 'aly', 'AL5G25490' => 'aly', 'AL8G35920' => 'aly', 'Aqoxy1G00917' => 'aox', 'arahy.Tifrunner.gnm1.ann1.113P23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1BB2MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3IN8BH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JIH5H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3U6Z4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8X00QX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB81A0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ANV44B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F9DTFM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FPX6WQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G0Z736' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KFT90B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TG3K0K' => 'arhy', 'AT1G07520' => 'ath', 'AT1G07530' => 'ath', 'AT2G29060' => 'ath', 'AT2G29065' => 'ath', 'AT2G37650' => 'ath', 'AT3G46600' => 'ath', 'AT5G59450' => 'ath', 'ATR0559G331' => 'atr', 'Atru.chr12.423' => 'acertr', 'Atru.chr3.3980' => 'acertr', 'Atru.chr3.3981' => 'acertr', 'Atru.chr3.3984' => 'acertr', 'Atru.chr8.1988' => 'acertr', 'AUR62001763' => 'cqu', 'AUR62001764' => 'cqu', 'AUR62001765' => 'cqu', 'AUR62001766' => 'cqu', 'AUR62001768' => 'cqu', 'AUR62009548' => 'cqu', 'AUR62009551' => 'cqu', 'AUR62009552' => 'cqu', 'AUR62009554' => 'cqu', 'AUR62009555' => 'cqu', 'AUR62009556' => 'cqu', 'AUR62012109' => 'cqu', 'AUR62039362' => 'cqu', 'AUR62041351' => 'cqu', 'BcaB01g01003' => 'bca', 'BcaB01g03764' => 'bca', 'BcaB02g06735' => 'bca', 'BcaB02g10227' => 'bca', 'BcaB02g10229' => 'bca', 'BcaB02g10231' => 'bca', 'BcaB03g13389' => 'bca', 'BcaB03g13390' => 'bca', 'BcaB04g17746' => 'bca', 'BcaB05g23551' => 'bca', 'BcaB06g28272' => 'bca', 'BcaB08g36257' => 'bca', 'BcaB08g36275' => 'bca', 'BcaC01g05602' => 'bca', 'BcaC02g08114' => 'bca', 'BcaC02g11040' => 'bca', 'BcaC02g11042' => 'bca', 'BcaC04g19767' => 'bca', 'BcaC04g19768' => 'bca', 'BcaC05g24692' => 'bca', 'BcaC07g41992' => 'bca', 'BcaC07g41993' => 'bca', 'BcaC07g42479' => 'bca', 'BcaC07g42480' => 'bca', 'BcaC09g49756' => 'bca', 'BolC1t03261H' => 'bol', 'BolC3t14842H' => 'bol', 'BolC3t19347H' => 'bol', 'BolC3t19348H' => 'bol', 'BolC4t23707H' => 'bol', 'BolC4t23708H' => 'bol', 'BolC4t27345H' => 'bol', 'BolC5t29324H' => 'bol', 'BolC8t47110H' => 'bol', 'BolC8t52579H' => 'bol', 'BolC8t52580H' => 'bol', 'BolC9t58048H' => 'bol', 'BraA01t02541Z' => 'bra', 'BraA03t11319Z' => 'bra', 'BraA04t17770Z' => 'bra', 'BraA06t25166Z' => 'bra', 'BraA07t29653Z' => 'bra', 'BraA07t29654Z' => 'bra', 'BraA08t35467Z' => 'bra', 'BraA09t41972Z' => 'bra', 'BraA09t41973Z' => 'bra', 'BraA10t42866Z' => 'bra', 'BraA10t43748Z' => 'bra', 'C01p33280' => 'bna', 'C03p24430' => 'bna', 'C03p70750' => 'bna', 'C03p70760' => 'bna', 'C04p21880' => 'bna', 'C04p21890' => 'bna', 'C04p58170' => 'bna', 'C05p05530' => 'bna', 'C08p03120' => 'bna', 'C08p50520' => 'bna', 'C08p50530' => 'bna', 'C09p51860' => 'bna', 'CAN.G1208.2' => 'can', 'CAN.G1273.14' => 'can', 'CAN.G1366.19' => 'can', 'CAN.G1392.4' => 'can', 'CAN.G1685.2' => 'can', 'CAN.G1861.5' => 'can', 'CAN.G394.66' => 'can', 'CAN.G394.67' => 'can', 'CAN.G473.7' => 'can', 'CAN.G499.6' => 'can', 'CAN.G874.76' => 'can', 'CAN.G92.24' => 'can', 'CANSAT11G1208' => 'cansat', 'CANSAT54G0612' => 'cansat', 'CANSAT54G0960' => 'cansat', 'CANSAT54G1017' => 'cansat', 'CANSAT54G1084' => 'cansat', 'CANSAT54G1611' => 'cansat', 'CANSAT54G2100' => 'cansat', 'CANSAT54G2138' => 'cansat', 'CARHR007290' => 'chi', 'CARHR007300' => 'chi', 'CARHR122290' => 'chi', 'CARHR122330' => 'chi', 'CARHR131930' => 'chi', 'CARHR155210' => 'chi', 'CARHR285820' => 'chi', 'Carub.0001s0684' => 'cru', 'Carub.0001s0685' => 'cru', 'Carub.0004s1005' => 'cru', 'Carub.0004s1006' => 'cru', 'Carub.0004s1958' => 'cru', 'Carub.0005s1287' => 'cru', 'Carub.0008s2012' => 'cru', 'Ca_01316_v3' => 'car', 'Ca_01317_v3' => 'car', 'Ca_04428_v3' => 'car', 'Ca_07558_v3' => 'car', 'Ca_19150_v3' => 'car', 'Ca_19151_v3' => 'car', 'Ca_19152_v3' => 'car', 'Ca_19153_v3' => 'car', 'Ca_19154_v3' => 'car', 'Cc01_g04280' => 'ccan', 'Cc01_g04290' => 'ccan', 'Cc01_g04300' => 'ccan', 'Cc01_g04310' => 'ccan', 'Cc01_g06640' => 'ccan', 'Cc01_g06650' => 'ccan', 'Cc01_g13060' => 'ccan', 'Cc01_g13070' => 'ccan', 'Cc02_g07650' => 'ccan', 'Cc06_g22670' => 'ccan', 'CDE02G0964' => 'cde', 'CDE02G4239' => 'cde', 'CDE04G2956' => 'cde', 'CDE07G1789' => 'cde', 'CDE08G0123' => 'cde', 'CDE09G1355' => 'cde', 'Ciclev10011141m.g' => 'ccl', 'Ciclev10027848m.g' => 'ccl', 'Ciclev10027926m.g' => 'ccl', 'Ciclev10027940m.g' => 'ccl', 'Ciclev10029999m.g' => 'ccl', 'Ciclev10030787m.g' => 'ccl', 'CiPaw.01G288900' => 'cil', 'CiPaw.02G185200' => 'cil', 'CiPaw.09G194200' => 'cil', 'CiPaw.09G194300' => 'cil', 'CiPaw.13G091900' => 'cil', 'CiPaw.13G092000' => 'cil', 'CiPaw.13G092100' => 'cil', 'CiPaw.13G092200' => 'cil', 'CiPaw.13G092300' => 'cil', 'CiPaw.14G067500' => 'cil', 'CiPaw.14G067600' => 'cil', 'ClCG02G020030' => 'cla', 'ClCG03G001380' => 'cla', 'ClCG10G021200' => 'cla', 'COL.COLO4_14784' => 'col', 'COL.COLO4_15079' => 'col', 'COL.COLO4_18533' => 'col', 'COL.COLO4_18534' => 'col', 'COL.COLO4_18535' => 'col', 'COL.COLO4_18541' => 'col', 'COL.COLO4_18542' => 'col', 'Cpa.g.c38558' => 'cpa', 'Cpa.g.sc1.422' => 'cpa', 'Cpa.g.sc169.25' => 'cpa', 'Cpa.g.sc81.122' => 'cpa', 'Cpa.g.sc81.123' => 'cpa', 'Cpa.g.sc81.124' => 'cpa', 'Cpa.g.sc81.125' => 'cpa', 'Cpa.g.sc81.126' => 'cpa', 'CsaV3_1G034420' => 'csa', 'CsaV3_3G034840' => 'csa', 'CsaV3_6G016730' => 'csa', 'CSS0006558' => 'camsi', 'CSS0007941' => 'camsi', 'CSS0010893' => 'camsi', 'CSS0016326' => 'camsi', 'CSS0016464' => 'camsi', 'CSS0020075' => 'camsi', 'CSS0022153' => 'camsi', 'CSS0027068' => 'camsi', 'CSS0027267' => 'camsi', 'CSS0027812' => 'camsi', 'CSS0031868' => 'camsi', 'CSS0032666' => 'camsi', 'CSS0033990' => 'camsi', 'CSS0040741' => 'camsi', 'CSS0043762' => 'camsi', 'CSS0044682' => 'camsi', 'CSS0045888' => 'camsi', 'CSS0050295' => 'camsi', 'DCAR_005962' => 'dca', 'DCAR_015630' => 'dca', 'DCAR_018918' => 'dca', 'DCAR_018919' => 'dca', 'DCAR_024945' => 'dca', 'DCAR_027606' => 'dca', 'DCAR_028749' => 'dca', 'Dinv00883' => 'din', 'Dinv00884' => 'din', 'Dinv00885' => 'din', 'Dinv04184' => 'din', 'Dinv04185' => 'din', 'Dinv04187' => 'din', 'Dinv04188' => 'din', 'Dinv04189' => 'din', 'Dinv04190' => 'din', 'Dinv06257' => 'din', 'Dinv06258' => 'din', 'Dinv08147' => 'din', 'Dinv15464' => 'din', 'Dinv15861' => 'din', 'Dinv17023' => 'din', 'Dinv17024' => 'din', 'Dinv17025' => 'din', 'Dinv17026' => 'din', 'Dinv17027' => 'din', 'Dinv26030' => 'din', 'Dinv35588' => 'din', 'Dinv37163' => 'din', 'Dinv42971' => 'din', 'Dinv42972' => 'din', 'Dinv42973' => 'din', 'Dinv42974' => 'din', 'Dinv42975' => 'din', 'Dinv43124' => 'din', 'Dinv43125' => 'din', 'Dinv43126' => 'din', 'Dinv43127' => 'din', 'Dinv43128' => 'din', 'Duzib093G2224' => 'dzi', 'Duzib106G2026' => 'dzi', 'Duzib114G0216' => 'dzi', 'Duzib150G0342' => 'dzi', 'Duzib150G0437' => 'dzi', 'Duzib150G0542' => 'dzi', 'Duzib150G1686' => 'dzi', 'Duzib168G0531' => 'dzi', 'Duzib168G1119' => 'dzi', 'Duzib168G2032' => 'dzi', 'Duzib168G2322' => 'dzi', 'Duzib170G1121' => 'dzi', 'ECA233G0506' => 'eca', 'ECA236G0139' => 'eca', 'ECA236G2389' => 'eca', 'ECA236G3994' => 'eca', 'ECA238G3627' => 'eca', 'ECA247G0103' => 'eca', 'ECA247G1788' => 'eca', 'ECA247G2534' => 'eca', 'ECA247G3117' => 'eca', 'ECA248G0571' => 'eca', 'ECA248G3483' => 'eca', 'EL10Ac2g04731' => 'bvu', 'EL10Ac7g16037' => 'bvu', 'EL10Ac7g16038' => 'bvu', 'EL10Ac7g16039' => 'bvu', 'EL10Ac7g16040' => 'bvu', 'EL10Ac7g16041' => 'bvu', 'Eucgr.A01279' => 'egr', 'Eucgr.B02328' => 'egr', 'Eucgr.B02329' => 'egr', 'Eucgr.B02330' => 'egr', 'Eucgr.B02331' => 'egr', 'Eucgr.B02335' => 'egr', 'Eucgr.B02337' => 'egr', 'Eucgr.B02340' => 'egr', 'Eucgr.B02341' => 'egr', 'Eucgr.B02342' => 'egr', 'Eucgr.B02343' => 'egr', 'Eucgr.B02344' => 'egr', 'Eucgr.B02345' => 'egr', 'Eucgr.B02346' => 'egr', 'Eucgr.B02347' => 'egr', 'Eucgr.B02348' => 'egr', 'Eucgr.B02349' => 'egr', 'Eucgr.B02350' => 'egr', 'Eucgr.G02939' => 'egr', 'Eucgr.G02940' => 'egr', 'Eucgr.G02941' => 'egr', 'Eucgr.J01242' => 'egr', 'Eucgr.J01244' => 'egr', 'Eucgr.J02040' => 'egr', 'Eucgr.J02041' => 'egr', 'Eucgr.J02042' => 'egr', 'Eucgr.J02043' => 'egr', 'Eucgr.J02044' => 'egr', 'Eucgr.K01383' => 'egr', 'Eucgr.K01384' => 'egr', 'Eucgr.K03117' => 'egr', 'Eucgr.K03118' => 'egr', 'Eucgr.K03119' => 'egr', 'Eucgr.K03122' => 'egr', 'Eucgr.K03126' => 'egr', 'Eucgr.K03127' => 'egr', 'Eucgr.K03128' => 'egr', 'Eucgr.L02817' => 'egr', 'FAN01G1270' => 'fan', 'FAN01G3076' => 'fan', 'FAN02G1622' => 'fan', 'FAN03G2709' => 'fan', 'FAN05G4134' => 'fan', 'FAN06G0772' => 'fan', 'FAN09G1754' => 'fan', 'FAN10G0700' => 'fan', 'FAN10G2565' => 'fan', 'FAN11G1824' => 'fan', 'FAN11G1849' => 'fan', 'FAN11G2486' => 'fan', 'FAN11G2730' => 'fan', 'FAN11G3338' => 'fan', 'FAN11G3629' => 'fan', 'FAN11G3952' => 'fan', 'FAN12G3647' => 'fan', 'FAN13G3298' => 'fan', 'FAN14G1349' => 'fan', 'FAN16G0366' => 'fan', 'FAN16G0838' => 'fan', 'FAN16G1317' => 'fan', 'FAN16G1457' => 'fan', 'FAN16G1752' => 'fan', 'FAN16G1835' => 'fan', 'FAN16G2081' => 'fan', 'FAN16G2438' => 'fan', 'FAN16G2457' => 'fan', 'FAN16G2951' => 'fan', 'FAN16G2981' => 'fan', 'FAN16G3088' => 'fan', 'FAN16G3146' => 'fan', 'FAN21G0209' => 'fan', 'FAN21G0211' => 'fan', 'FAN21G2229' => 'fan', 'FAN21G2667' => 'fan', 'FAN21G3068' => 'fan', 'FAN21G3958' => 'fan', 'FAN25G0784' => 'fan', 'FAN25G1007' => 'fan', 'FAN25G1417' => 'fan', 'FAN25G1593' => 'fan', 'FAN25G2036' => 'fan', 'FAN25G2116' => 'fan', 'FAN25G2830' => 'fan', 'FAN25G2889' => 'fan', 'FvH4_3g36540' => 'fve', 'FvH4_3g36550' => 'fve', 'FvH4_3g36570' => 'fve', 'FvH4_3g36580' => 'fve', 'FvH4_3g36630' => 'fve', 'FvH4_3g36641' => 'fve', 'FvH4_3g36660' => 'fve', 'FvH4_3g36661' => 'fve', 'FvH4_3g36662' => 'fve', 'FvH4_3g36670' => 'fve', 'FvH4_3g36680' => 'fve', 'FvH4_3g36690' => 'fve', 'FvH4_3g36691' => 'fve', 'FvH4_3g36700' => 'fve', 'FvH4_3g36711' => 'fve', 'FvH4_3g36720' => 'fve', 'FvH4_3g36730' => 'fve', 'FvH4_3g36760' => 'fve', 'FvH4_5g17360' => 'fve', 'FvH4_6g13520' => 'fve', 'FvH4_7g22720' => 'fve', 'Glyma.03G065700' => 'gma', 'Glyma.07G133100' => 'gma', 'Glyma.11G138000' => 'gma', 'Glyma.11G138100' => 'gma', 'Glyma.11G138300' => 'gma', 'Glyma.11G138400' => 'gma', 'Glyma.11G138502' => 'gma', 'Glyma.11G138600' => 'gma', 'Glyma.12G061900' => 'gma', 'Glyma.12G062000' => 'gma', 'Glyma.12G062100' => 'gma', 'Glyma.12G062200' => 'gma', 'Glyma.13G337200' => 'gma', 'Glyma.13G337300' => 'gma', 'Glyma.13G337400' => 'gma', 'Glyma.13G337466' => 'gma', 'Glyma.13G337600' => 'gma', 'Glyma.15G036900' => 'gma', 'Glyma.15G037000' => 'gma', 'Glyma.15G037100' => 'gma', 'Glyma.15G037200' => 'gma', 'Glyma.18G182500' => 'gma', 'Gohir.A03G043500' => 'ghi', 'Gohir.A03G043600' => 'ghi', 'Gohir.A03G043700' => 'ghi', 'Gohir.A05G094400' => 'ghi', 'Gohir.A05G094500' => 'ghi', 'Gohir.A06G166500' => 'ghi', 'Gohir.A07G099200' => 'ghi', 'Gohir.A07G099300' => 'ghi', 'Gohir.A08G000600' => 'ghi', 'Gohir.A10G220600' => 'ghi', 'Gohir.A11G327200' => 'ghi', 'Gohir.D03G123700' => 'ghi', 'Gohir.D03G123800' => 'ghi', 'Gohir.D03G123900' => 'ghi', 'Gohir.D05G094900' => 'ghi', 'Gohir.D05G094950' => 'ghi', 'Gohir.D06G172000' => 'ghi', 'Gohir.D07G103600' => 'ghi', 'Gohir.D07G103700' => 'ghi', 'Gohir.D08G011500' => 'ghi', 'Gohir.D10G232800' => 'ghi', 'Gohir.D11G346100' => 'ghi', 'Gorai.001G111500' => 'gra', 'Gorai.001G111600' => 'gra', 'Gorai.003G130400' => 'gra', 'Gorai.003G130500' => 'gra', 'Gorai.003G130600' => 'gra', 'Gorai.004G005200' => 'gra', 'Gorai.007G376400' => 'gra', 'Gorai.009G098100' => 'gra', 'Gorai.009G098200' => 'gra', 'Gorai.010G201000' => 'gra', 'Gorai.011G266200' => 'gra', 'GSVIVG01016520001' => 'vvi', 'GSVIVG01016521001' => 'vvi', 'GSVIVG01016522001' => 'vvi', 'GSVIVG01016523001' => 'vvi', 'GSVIVG01024931001' => 'vvi', 'GSVIVG01024932001' => 'vvi', 'GSVIVG01024933001' => 'vvi', 'GSVIVG01024935001' => 'vvi', 'GSVIVG01034155001' => 'vvi', 'HanXRQChr02g0033171' => 'han', 'HanXRQChr04g0125441' => 'han', 'HanXRQChr06g0178971' => 'han', 'HanXRQChr07g0201421' => 'han', 'HanXRQChr08g0220921' => 'han', 'HanXRQChr08g0221081' => 'han', 'HanXRQChr08g0221091' => 'han', 'HanXRQChr08g0221101' => 'han', 'HanXRQChr11g0325301' => 'han', 'HanXRQChr12g0374251' => 'han', 'HanXRQChr12g0374261' => 'han', 'HanXRQChr12g0376131' => 'han', 'HanXRQChr14g0428121' => 'han', 'HanXRQChr16g0500641' => 'han', 'Haze_01094' => 'cav', 'Haze_08549' => 'cav', 'Haze_20808' => 'cav', 'Haze_20810' => 'cav', 'Haze_24118' => 'cav', 'Haze_24119' => 'cav', 'Haze_24121' => 'cav', 'Haze_24122' => 'cav', 'Haze_24123' => 'cav', 'Haze_24124' => 'cav', 'Haze_24125' => 'cav', 'Hma1.2p1_0615F.1_g189820' => 'hma', 'Hma1.2p1_0615F.1_g189830' => 'hma', 'Hma1.2p1_0615F.1_g189840' => 'hma', 'Hma1.2p1_0757F.1_g213240' => 'hma', 'Hma1.2p1_0771F.1_g215960' => 'hma', 'Hma1.2p1_0936F.1_g238800' => 'hma', 'Hma1.2p1_1420F.1_g282330' => 'hma', 'Hma1.2p1_1420F.1_g282340' => 'hma', 'Hma1.2p1_1420F.1_g282350' => 'hma', 'Hma1.2p1_1420F.1_g282360' => 'hma', 'Hma1.2p1_1420F.1_g282370' => 'hma', 'Hma1.2p1_1861F.1_g305650' => 'hma', 'Hma1.2p1_1861F.1_g305675' => 'hma', 'HPP92_001493' => 'vpl', 'HPP92_006622' => 'vpl', 'HPP92_019836' => 'vpl', 'HPP92_021128' => 'vpl', 'Lalb_Chr01g0003581' => 'lal', 'Lalb_Chr01g0003591' => 'lal', 'Lalb_Chr01g0022541' => 'lal', 'Lalb_Chr03g0026541' => 'lal', 'Lalb_Chr13g0291201' => 'lal', 'Lalb_Chr14g0375141' => 'lal', 'Lalb_Chr14g0375151' => 'lal', 'Lalb_Chr22g0349891' => 'lal', 'Lalb_Chr24g0394071' => 'lal', 'Lj1C149G9' => 'lonja', 'Lj1C149T4' => 'lonja', 'Lj1P149T39' => 'lonja', 'Lj2C1066G3' => 'lonja', 'Lj2C1066T2' => 'lonja', 'Lj3g0000169' => 'lja', 'Lj3g0000890' => 'lja', 'Lj3g0004278' => 'lja', 'Lj3g0007584' => 'lja', 'Lj3g0008286' => 'lja', 'Lj3g0008655' => 'lja', 'Lj3g0022203' => 'lja', 'Lj3g0022633' => 'lja', 'Lj3g0024419' => 'lja', 'Lj3g0025200' => 'lja', 'Lj3P966T33' => 'lonja', 'Lj4g0026683' => 'lja', 'Lj8C82T13' => 'lonja', 'Lsat_1_v5_gn_2_118380' => 'lsa', 'Lsat_1_v5_gn_5_154481' => 'lsa', 'Lsat_1_v5_gn_5_169401' => 'lsa', 'Lsat_1_v5_gn_8_15220' => 'lsa', 'Lsat_1_v5_gn_8_73841' => 'lsa', 'Lsat_1_v5_gn_8_85281' => 'lsa', 'Lsat_1_v5_gn_9_23680' => 'lsa', 'Lsat_1_v5_gn_9_23720' => 'lsa', 'Lsat_1_v5_gn_9_23760' => 'lsa', 'Lsat_1_v5_gn_9_23820' => 'lsa', 'Manes.01G171700' => 'mes', 'Manes.01G171800' => 'mes', 'Manes.01G171900' => 'mes', 'Manes.01G172000' => 'mes', 'Manes.02G130800' => 'mes', 'Manes.02G130900' => 'mes', 'Manes.02G131000' => 'mes', 'Manes.02G131100' => 'mes', 'Manes.07G117400' => 'mes', 'Manes.08G089000' => 'mes', 'Manes.10G029200' => 'mes', 'Mapoly0001s0385' => 'mpo', 'MBI05_g28377_MAGBIO' => 'mbi', 'MBI14_g12120_MAGBIO' => 'mbi', 'MD03G1088900' => 'mdo', 'MD03G1089100' => 'mdo', 'MD03G1089200' => 'mdo', 'MD03G1089300' => 'mdo', 'MD03G1089700' => 'mdo', 'MD03G1089800' => 'mdo', 'MD04G1130400' => 'mdo', 'MD11G1097900' => 'mdo', 'MD11G1098000' => 'mdo', 'MD11G1098100' => 'mdo', 'MD11G1098400' => 'mdo', 'MD11G1098900' => 'mdo', 'MD11G1099000' => 'mdo', 'MD11G1099100' => 'mdo', 'MD12G1143500' => 'mdo', 'Medtr2g097310' => 'mtr', 'Medtr2g097350' => 'mtr', 'Medtr2g097370' => 'mtr', 'Medtr2g097380' => 'mtr', 'Medtr2g097390' => 'mtr', 'Medtr2g097410' => 'mtr', 'Medtr2g097463' => 'mtr', 'Medtr2g097467' => 'mtr', 'Medtr2g097473' => 'mtr', 'Medtr4g064120' => 'mtr', 'Medtr4g064150' => 'mtr', 'Medtr4g064160' => 'mtr', 'Medtr4g064180' => 'mtr', 'Medtr4g064200' => 'mtr', 'Medtr7g062120' => 'mtr', 'Medtr8g065750' => 'mtr', 'MELO3C009253.2' => 'cme', 'MELO3C020619.2' => 'cme', 'MELO3C025904.2' => 'cme', 'Migut.D02076' => 'egut', 'Migut.D02077' => 'egut', 'Migut.D02079' => 'egut', 'Migut.F00778' => 'egut', 'Migut.L01952' => 'egut', 'MSTRG.10254' => 'ama', 'MSTRG.18566' => 'ama', 'MSTRG.21207' => 'ama', 'MSTRG.26779' => 'ama', 'MSTRG.281' => 'ama', 'MSTRG.8256' => 'ama', 'Nitab4.5_0000105g0260' => 'nta', 'Nitab4.5_0000349g0320' => 'nta', 'Nitab4.5_0000368g0350' => 'nta', 'Nitab4.5_0000463g0090' => 'nta', 'Nitab4.5_0000647g0060' => 'nta', 'Nitab4.5_0000705g0190' => 'nta', 'Nitab4.5_0001002g0010' => 'nta', 'Nitab4.5_0001326g0090' => 'nta', 'Nitab4.5_0001911g0070' => 'nta', 'Nitab4.5_0002715g0060' => 'nta', 'Nitab4.5_0002902g0010' => 'nta', 'Nitab4.5_0004639g0010' => 'nta', 'Nitab4.5_0006365g0090' => 'nta', 'Nitab4.5_0007997g0010' => 'nta', 'Nn2g11146' => 'nnu', 'Nn2g13377' => 'nnu', 'Oeu003803.1' => 'oeu', 'Oeu004162.1' => 'oeu', 'Oeu011412.2' => 'oeu', 'Oeu016529.4' => 'oeu', 'Oeu016535.1' => 'oeu', 'Oeu036135.3' => 'oeu', 'Oeu048232.2' => 'oeu', 'Oeu053882.1' => 'oeu', 'Oeu053896.1' => 'oeu', 'Oeu064110.2' => 'oeu', 'Os01g0842200' => 'osa', 'Os03g0690600' => 'osa', 'Os04g0590400' => 'osa', 'Os11g0139600' => 'osa', 'Os11g0705200' => 'osa', 'Os11g0705900' => 'osa', 'Os11g0706200' => 'osa', 'Os12g0573200' => 'osa', 'Peaxi162Scf00004g00092' => 'pax', 'Peaxi162Scf00073g00110' => 'pax', 'Peaxi162Scf00164g01128' => 'pax', 'Peaxi162Scf00165g00091' => 'pax', 'Peaxi162Scf00330g00063' => 'pax', 'Peaxi162Scf00330g00619' => 'pax', 'Peaxi162Scf00413g00061' => 'pax', 'Peaxi162Scf00760g00035' => 'pax', 'Peaxi162Scf00774g00022' => 'pax', 'Peaxi162Scf00774g00220' => 'pax', 'Peaxi162Scf00774g00221' => 'pax', 'PGR004G0956' => 'pgr', 'PGR031G1718' => 'pgr', 'PGR044G0277' => 'pgr', 'PGR102G0559' => 'pgr', 'PGR102G2821' => 'pgr', 'PGR102G2945' => 'pgr', 'PGR119G1223' => 'pgr', 'PGR119G1559' => 'pgr', 'PGR142G2660' => 'pgr', 'PGSC0003DMG400002139' => 'stu', 'PGSC0003DMG400006352' => 'stu', 'PGSC0003DMG400008904' => 'stu', 'PGSC0003DMG400019200' => 'stu', 'PGSC0003DMG400024781' => 'stu', 'PGSC0003DMG400027198' => 'stu', 'PGSC0003DMG400030468' => 'stu', 'PGSC0003DMG400042951' => 'stu', 'PGSC0003DMG401030325' => 'stu', 'PGSC0003DMG402030325' => 'stu', 'Phvul.008G119700' => 'pvu', 'Phvul.011G063000' => 'pvu', 'Phvul.011G063100' => 'pvu', 'Phvul.011G063200' => 'pvu', 'Phvul.011G063300' => 'pvu', 'Phvul.L006543' => 'pvu', 'Phvul.L006643' => 'pvu', 'Phvul.L006743' => 'pvu', 'Potri.001G241700' => 'ptr', 'Potri.001G241800' => 'ptr', 'Potri.001G241900' => 'ptr', 'Potri.001G242000' => 'ptr', 'Potri.001G242100' => 'ptr', 'Potri.006G086600' => 'ptr', 'Potri.008G057400' => 'ptr', 'Potri.009G032700' => 'ptr', 'Potri.009G032800' => 'ptr', 'Potri.009G032900' => 'ptr', 'Potri.009G033100' => 'ptr', 'Potri.009G033300' => 'ptr', 'Potri.010G202300' => 'ptr', 'Pp3c10_17630' => 'ppa', 'Pp3c15_17600' => 'ppa', 'Pp3c15_17620' => 'ppa', 'Pp3c17_13550' => 'ppa', 'Pp3c19_16060' => 'ppa', 'Pp3c2_11380' => 'ppa', 'Pp3c9_3340' => 'ppa', 'Prupe.2G237300' => 'ppe', 'Prupe.6G073300' => 'ppe', 'Prupe.6G073400' => 'ppe', 'Prupe.6G073500' => 'ppe', 'Prupe.6G073600' => 'ppe', 'Prupe.6G073700' => 'ppe', 'Prupe.6G073800' => 'ppe', 'Prupe.6G073900' => 'ppe', 'Prupe.6G074000' => 'ppe', 'Prupe.6G257000' => 'ppe', 'Prupe.I004400' => 'ppe', 'Prupe.I004500' => 'ppe', 'Psat3g138640' => 'psa', 'Psat5g285200' => 'psa', 'Psat5g285240' => 'psa', 'Psat5g285280' => 'psa', 'Psat7g215120' => 'psa', 'Psat7g215160' => 'psa', 'Psat7g215200' => 'psa', 'Psat7g215240' => 'psa', 'PSO017G0080' => 'pso', 'PSO017G2471' => 'pso', 'PSO017G3238' => 'pso', 'PSO017G7095' => 'pso', 'PSO063G0101' => 'pso', 'PSO063G0509' => 'pso', 'PSO063G1680' => 'pso', 'PSO063G2565' => 'pso', 'PSO063G4437' => 'pso', 'PSO063G5062' => 'pso', 'PSO063G6588' => 'pso', 'PSO339G0807' => 'pso', 'PSO339G4124' => 'pso', 'PSO801G0613' => 'pso', 'QL01p031113' => 'qlo', 'QL01p031142' => 'qlo', 'QL01p031149' => 'qlo', 'QL01p031206' => 'qlo', 'QL01p031249' => 'qlo', 'QL01p031257' => 'qlo', 'QL01p031287' => 'qlo', 'QL01p031308' => 'qlo', 'QL01p031328' => 'qlo', 'QL01p031377' => 'qlo', 'QL02p008430' => 'qlo', 'QL07p048651' => 'qlo', 'QL08p059475' => 'qlo', 'QL08p059488' => 'qlo', 'QL08p059512' => 'qlo', 'RcHm_v2.0_Chr1g0367811' => 'rch', 'RcHm_v2.0_Chr3g0466391' => 'rch', 'RcHm_v2.0_Chr5g0065461' => 'rch', 'RcHm_v2.0_Chr5g0065481' => 'rch', 'RcHm_v2.0_Chr5g0065491' => 'rch', 'RcHm_v2.0_Chr5g0065511' => 'rch', 'RcHm_v2.0_Chr5g0065531' => 'rch', 'RcHm_v2.0_Chr5g0065541' => 'rch', 'RcHm_v2.0_Chr5g0065561' => 'rch', 'RcHm_v2.0_Chr5g0065571' => 'rch', 'RcHm_v2.0_Chr5g0065581' => 'rch', 'RcHm_v2.0_Chr5g0065591' => 'rch', 'RcHm_v2.0_Chr5g0065601' => 'rch', 'RcHm_v2.0_Chr5g0065621' => 'rch', 'RcHm_v2.0_Chr5g0065631' => 'rch', 'RcHm_v2.0_Chr5g0065641' => 'rch', 'RcHm_v2.0_Chr5g0065651' => 'rch', 'RcHm_v2.0_Chr5g0065671' => 'rch', 'RcHm_v2.0_Chr5g0065721' => 'rch', 'RcHm_v2.0_Chr5g0065731' => 'rch', 'RcHm_v2.0_Chr5g0065751' => 'rch', 'RcHm_v2.0_Chr5g0065791' => 'rch', 'RcHm_v2.0_Chr5g0065811' => 'rch', 'Rhsim01G0150900' => 'rsi', 'Rhsim01G0230200' => 'rsi', 'Rhsim01G0230300' => 'rsi', 'Rhsim02G0098900' => 'rsi', 'Rhsim03G0132900' => 'rsi', 'Rhsim04G0157900' => 'rsi', 'Rhsim05G0208500' => 'rsi', 'Rhsim08G0193400' => 'rsi', 'Rhsim10G0123900' => 'rsi', 'Rhsim10G0178700' => 'rsi', 'Rhsim10G0178900' => 'rsi', 'Rhsim10G0179300' => 'rsi', 'Rhsim13G0078900' => 'rsi', 'Rhsim13G0079000' => 'rsi', 'Rhsim13G0079200' => 'rsi', 'Rhsim13G0079300' => 'rsi', 'Rhsim13G0079400' => 'rsi', 'Rhsim13G0079500' => 'rsi', 'Rhsim13G0079600' => 'rsi', 'Rhsim13G0079700' => 'rsi', 'Rhsim13G0079800' => 'rsi', 'Rhsim13G0079900' => 'rsi', 'Rhsim13G0080000' => 'rsi', 'Rhsim13G0080100' => 'rsi', 'Rhsim13G0080200' => 'rsi', 'Rhsim13G0080300' => 'rsi', 'Rhsim13G0080500' => 'rsi', 'Rhsim13G0080600' => 'rsi', 'Sabra06G0066100' => 'sbr', 'Sabra08G0041900' => 'sbr', 'Sabra09G0023300' => 'sbr', 'Sabra09G0023400' => 'sbr', 'Sabra09G0023500' => 'sbr', 'Sabra09G0023600' => 'sbr', 'Sabra09G0023700' => 'sbr', 'Sabra16G0146200' => 'sbr', 'Sabra16G0146300' => 'sbr', 'Sabra16G0146400' => 'sbr', 'Sabra16G0146500' => 'sbr', 'Sabra16G0146600' => 'sbr', 'Sabra16G0146800' => 'sbr', 'SalBow3G1890' => 'sbo', 'SalBow3G2129' => 'sbo', 'SalBow4G0237' => 'sbo', 'SalBow4G1209' => 'sbo', 'SalBow6G1196' => 'sbo', 'Sc11g0007900' => 'sci', 'Sc12g0001380' => 'sci', 'Sc12g0001390' => 'sci', 'Sc12g0001400' => 'sci', 'Sc12g0001410' => 'sci', 'Sc21g0005890' => 'sci', 'Sc21g0005900' => 'sci', 'Sc21g0005910' => 'sci', 'Sc24g0002460' => 'sci', 'Sc25g0001360' => 'sci', 'Sed0002527' => 'sed', 'Sed0005877' => 'sed', 'Sed0015757' => 'sed', 'Sed0015974' => 'sed', 'Sed0016056' => 'sed', 'SEGI_00539' => 'sgi', 'SEGI_02737' => 'sgi', 'SGA_v2.0_scaffold126G33777' => 'sas', 'SGA_v2.0_scaffold126G33778' => 'sas', 'SGA_v2.0_scaffold203G41540' => 'sas', 'SGA_v2.0_scaffold203G41543' => 'sas', 'SGA_v2.0_scaffold203G41544' => 'sas', 'SGA_v2.0_scaffold2G01013' => 'sas', 'SGA_v2.0_scaffold2G01042' => 'sas', 'SGA_v2.0_scaffold35G14241' => 'sas', 'SGA_v2.0_scaffold35G14243' => 'sas', 'SGA_v2.0_scaffold35G14250' => 'sas', 'SGA_v2.0_scaffold41G15726' => 'sas', 'SGA_v2.0_scaffold43G16395' => 'sas', 'SGA_v2.0_scaffold94G28606' => 'sas', 'SHI05934' => 'shi', 'SMO110G0007' => 'smo', 'SMO142G0052' => 'smo', 'SMO143G0207' => 'smo', 'SMO144G0161' => 'smo', 'SMO171G0049' => 'smo', 'SMO171G0050' => 'smo', 'SMO171G0088' => 'smo', 'SMO171G0128' => 'smo', 'SMO171G0142' => 'smo', 'SMO203G0009' => 'smo', 'SMO252G0011' => 'smo', 'SMO308G0020' => 'smo', 'SMO331G0071' => 'smo', 'SMO353G0112' => 'smo', 'SMO353G0127' => 'smo', 'SMO353G0132' => 'smo', 'SMO353G0151' => 'smo', 'SMO353G0259' => 'smo', 'SMO353G0309' => 'smo', 'SMO353G0357' => 'smo', 'SMO353G0388' => 'smo', 'SMO356G0073' => 'smo', 'SMO356G0566' => 'smo', 'SMO358G0343' => 'smo', 'SMO358G0662' => 'smo', 'SMO367G0446' => 'smo', 'SMO367G0879' => 'smo', 'SMO367G0998' => 'smo', 'Solyc01g100200.3' => 'sly', 'Solyc04g011630.1' => 'sly', 'Solyc04g011640.3' => 'sly', 'Solyc05g053090.2' => 'sly', 'Solyc06g076280.3' => 'sly', 'Solyc06g076290.1' => 'sly', 'Solyc06g082530.3' => 'sly', 'Solyc09g010920.1' => 'sly', 'Solyc10g086530.1' => 'sly', 'Sopen01g043700' => 'spe', 'Sopen04g005810' => 'spe', 'Sopen05g031600' => 'spe', 'Sopen06g032710' => 'spe', 'Sopen06g033910' => 'spe', 'Sopen06g033930' => 'spe', 'Sopen09g005640' => 'spe', 'Sopen10g035910' => 'spe', 'Sp1g06250' => 'spa', 'Sp1g06260' => 'spa', 'Sp4g11870' => 'spa', 'Sp4g11880' => 'spa', 'Sp4g20010' => 'spa', 'Sp5g15090' => 'spa', 'Sp6g21140' => 'spa', 'TAR369G0488' => 'tar', 'TAR369G0507' => 'tar', 'TAR369G0712' => 'tar', 'TAR623G0146' => 'tar', 'TAR623G0258' => 'tar', 'TAR623G0923' => 'tar', 'TAR633G1396' => 'tar', 'THA.LOC104800673' => 'tha', 'THA.LOC104800674' => 'tha', 'THA.LOC104805531' => 'tha', 'THA.LOC104810766' => 'tha', 'THA.LOC104810767' => 'tha', 'THA.LOC104814880' => 'tha', 'THA.LOC104815784' => 'tha', 'Thecc.05G038000' => 'tca', 'Thecc.09G319000' => 'tca', 'Thecc.09G319200' => 'tca', 'Thecc.09G319400' => 'tca', 'Thecc.09G319500' => 'tca', 'Thecc.09G319600' => 'tca', 'Thecc.10G036300' => 'tca', 'Thhalv10002455m.g' => 'esa', 'Thhalv10006868m.g' => 'esa', 'Thhalv10006948m.g' => 'esa', 'Thhalv10013016m.g' => 'esa', 'Thhalv10016312m.g' => 'esa', 'Thhalv10016318m.g' => 'esa', 'Thhalv10016365m.g' => 'esa', 'TPR.G1720' => 'tpr', 'TPR.G23599' => 'tpr', 'TPR.G23608' => 'tpr', 'TPR.G23621' => 'tpr', 'TPR.G23625' => 'tpr', 'TPR.G23630' => 'tpr', 'TPR.G23633' => 'tpr', 'TPR.G27519' => 'tpr', 'TPR.G5555' => 'tpr', 'TPR.G5568' => 'tpr', 'TPR.G5605' => 'tpr', 'TPR.G5637' => 'tpr', 'TWI31G0197' => 'twi', 'TWI31G0969' => 'twi', 'TWI31G1294' => 'twi', 'TWI38G1369' => 'twi', 'TWI53G0589' => 'twi', 'TWI63G1804' => 'twi', 'TWI74G0433' => 'twi', 'TWI75G0287' => 'twi', 'TWI75G1522' => 'twi', 'TWI79G0063' => 'twi', 'TWI79G0454' => 'twi', 'TWI79G0462' => 'twi', 'TWI79G0938' => 'twi', 'unitig_0.g1561' => 'ugi', 'unitig_0.g1562' => 'ugi', 'unitig_22.g6688' => 'ugi', 'unitig_37.g12675' => 'ugi', 'unitig_37.g12676' => 'ugi', 'unitig_37.g12677' => 'ugi', 'unitig_37.g12678' => 'ugi', 'unitig_46.g18415' => 'ugi', 'unitig_46.g18416' => 'ugi', 'unitig_46.g18417' => 'ugi', 'unitig_6.g29273' => 'ugi', 'unitig_6.g29274' => 'ugi', 'unitig_747.g21433' => 'ugi', 'unitig_747.g22040' => 'ugi', 'vmacro03048' => 'vma', 'vmacro03049' => 'vma', 'vmacro03050' => 'vma', 'vmacro03051' => 'vma', 'vmacro03052' => 'vma', 'vmacro03053' => 'vma', 'vmacro03054' => 'vma', 'vmacro03055' => 'vma', 'vmacro03056' => 'vma', 'vmacro03057' => 'vma', 'vmacro03058' => 'vma', 'vmacro14545' => 'vma', 'vmacro14546' => 'vma', 'vmacro19144' => 'vma', 'vmacro22504' => 'vma', 'VMungo1080G1434' => 'vmu', 'VMungo1080G1537' => 'vmu', 'VMungo1080G1767' => 'vmu', 'VMungo1127G0224' => 'vmu', 'VMungo1127G0651' => 'vmu', 'VMungo1127G0868' => 'vmu', 'VMungo1383G0482' => 'vmu', 'VMungo1383G0490' => 'vmu', 'Zm00001eb012280' => 'zma', 'Zm00001eb029390' => 'zma', 'Zm00001eb049880' => 'zma', 'Zm00001eb062760' => 'zma', 'Zm00001eb081760' => 'zma', 'Zm00001eb112130' => 'zma', 'Zm00001eb115950' => 'zma', 'Zm00001eb136350' => 'zma', 'Zm00001eb148290' => 'zma', 'Zm00001eb164350' => 'zma', 'Zm00001eb164470' => 'zma', 'Zm00001eb164480' => 'zma', 'Zm00001eb164490' => 'zma', 'Zm00001eb164500' => 'zma', 'Zm00001eb164530' => 'zma', 'Zm00001eb165340' => 'zma', 'Zm00001eb266920' => 'zma', 'Zm00001eb266930' => 'zma', 'Zm00001eb355860' => 'zma', 'Zm00001eb355870' => 'zma', 'Zm00001eb397720' => 'zma' ) $gf_id = 'HOM05D000511' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000511' ) $data_identifier = 'HOM05D000511' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 22, 'aar' => (int) 6, 'aag' => (int) 8, 'ach' => (int) 17, 'amhyb' => (int) 9, 'aly' => (int) 8, 'aox' => (int) 1, 'arhy' => (int) 13, 'ath' => (int) 7, 'atr' => (int) 1, 'acertr' => (int) 5, 'cqu' => (int) 14, 'bca' => (int) 25, 'bol' => (int) 12, 'bra' => (int) 11, 'can' => (int) 12, 'cansat' => (int) 8, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 9, 'ccan' => (int) 10, 'cde' => (int) 6, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 3, 'col' => (int) 7, 'cpa' => (int) 8, 'csa' => (int) 3, 'camsi' => (int) 18, 'dca' => (int) 7, 'din' => (int) 32, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 6, 'egr' => (int) 38, 'fan' => (int) 46, 'fve' => (int) 21, 'gma' => (int) 22, 'ghi' => (int) 22, 'gra' => (int) 11, 'vvi' => (int) 9, 'han' => (int) 14, 'cav' => (int) 11, 'hma' => (int) 13, 'vpl' => (int) 4, 'lal' => (int) 9, 'lonja' => (int) 7, 'lja' => (int) 11, 'lsa' => (int) 10, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 16, 'cme' => (int) 3, 'egut' => (int) 5, 'ama' => (int) 6, 'nta' => (int) 14, 'nnu' => (int) 2, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 8, 'ptr' => (int) 13, 'ppa' => (int) 7, 'ppe' => (int) 12, 'psa' => (int) 8, 'pso' => (int) 14, 'qlo' => (int) 15, 'rch' => (int) 23, 'rsi' => (int) 28, 'sbr' => (int) 13, 'sbo' => (int) 5, 'sci' => (int) 10, 'sed' => (int) 5, 'sgi' => (int) 2, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 28, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 7, 'tar' => (int) 7, 'tha' => (int) 7, 'tca' => (int) 7, 'esa' => (int) 7, 'tpr' => (int) 12, 'twi' => (int) 13, 'ugi' => (int) 14, 'vma' => (int) 15, 'vmu' => (int) 8, 'zma' => (int) 21 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397720' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1